CDS

Accession Number TCMCG051C44825
gbkey CDS
Protein Id XP_024444614.1
Location join(2853131..2853664,2854152..2854217,2854303..2854446,2854992..2855200,2855388..2855553,2855709..2855819,2856125..2856222,2856777..2856855,2858729..2858887,2859280..2859369,2860058..2860191,2860634..2860793,2860994..2861077,2861211..2861423,2861669..2861794,2862623..2862760,2863161..2863264,2863389..2863452,2863660..2863748,2863826..2863967,2864544..2864607,2864688..2864755,2865188..2865310,2865783..2865848,2866429..2866540,2866619..2866719,2866827..2866934)
Gene LOC18106949
GeneID 18106949
Organism Populus trichocarpa

Protein

Length 1183aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024588846.1
Definition isoleucine--tRNA ligase, cytoplasmic isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class-I aminoacyl-tRNA synthetase family
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R03656        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01870        [VIEW IN KEGG]
EC 6.1.1.5        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004822        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006428        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0017101        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGAAGTCTGTGAAGGAAAAGAATTCTCCTTTCCAACGCAAGAAGAAAAGATCCTCTCCTTCTGGTCAGAAATCAAAGCCTTTGAAACCCAATTAGAACGCACCAAAGACCTCCCTGAATACATCTTCTACGACGGTCCACCGTTCGCCACTGGGTTACCTCACTATGGACACATTTTAGCCGGTACAATCAAAGATATTGTGACCAGATACCAGACGATGACAGGGCACCATGTGACACGTCGTTTTGGATGGGATTGCCATGGATTGCCCGTTGAAGCTGAGATTGATAAGAAATTAGGGATTAAGAGAAGGGATGAGGTGTTGAAATTGGGGATTGATAAGTACAATGAAGAGTGTAGAGGGATTGTTACAAGGTACGTGGGGGAATGGGAGAAAGTTGTTGTTAGAGTTGGGAGATGGATTGATTTTAAGAATGATTATAAGACCATGGATTTGAAGTTTATGGAGAGTGTTTGGTGGGTTTTTTCCAAGTTGTTTGAGAAGGGGCTTGTTTACAAGGGTTTTAAGGTCATGCCTTACAGTACAGGTTGCAAAACTGTTCTGTCAAATTTTGAAGTTCAGCAGAATTATAAGGACGTACCTGATCCTGAGATAATGGTCACATTTCCAATTGTTGATGATCCACACAATGCAGCTTTCGTTGCTTGGACAACTACGCCATGGACTCTTCCCAGTAATCTTGCCCTTTGCGTTAATGGAAATTTTGACTATATCAAGGTTCGTAACAAGTACACTGGAAAAGTCTATGTAGTTGCTGAATGTAGGCTGTCAGCACTTCCTGTTGAGAAACCAAAATCAACTGCAAATGGACCTGCTGGTGGTTCAAAGACATCAAATTCTAAAACTAAGAGTGGGAAGGCTGAAAACTTGATGGATTCTTATGATTTGTTGGAGAAAGTCAAGGGCAATGAGTTGGTGAATAAGAAGTATGAGCCGCTATTCAATTACTTCATGGAGTTCTCTGACACTGCATTTAGAGTTGTTGCCGATGATTACGTGACTGATGACAGCGGTACTGGCATTGTTCACTGTGCTCCTGCATTTGGTGAAGAGGATTACCGTGTTTGCATTGGAAATCAAATACTCAGTAAGGAGAATTTGATTGTAGCTGTTGATGATGATGGCTGCTTCATTGAAAAAATTACTGATTTCGGTGGGCGCTATGTCAAGGATGCAGACAAGGATATCATTGAAGCAGTGAAGGCAAAAGGCAGGCTTGTTAAGTCTGGGAGCTTTATGCATTCCTATCCCTTCTGTTGGAGATCTGATACACCTCTCATTTATAGAGCTGTTCCAAGCTGGTTTATTAGAGTGGAAGAAATAAAAGAGCAACTGTTAGAAAGCAACAAACAAACATACTGGGTTCCTGATTATGTAAAGGAGAAACGGTTTCACAACTGGCTTGAAAATGCTAGAGACTGGGCAGTTAGTAGAAGTCGATTTTGGGGCACTCCTCTACCTGTATGGATGAGTGATGATGGTGAAGAAGTAATAGTCATGGATTCTATTGCTAAACTTGAGAAGCTTTCTGGTGTTAAGGTGTTTGATCTGCATCGTCATAATATTGATCACATCACAATCCCATCCAGTCGAGGTCCTGAATTTGATGTGCTTCGACGTGTTGAGGATGTATTTGATTGTTGGTTTGAGAGTGGGTCGATGCCTTATGCTTATATCCATTATCCATTTGAGAATGTTGAACTTTTTGAGAAAAATTTTCCTGGGCATTTTGTGGCTGAAGGGCTAGATCAAACTCGTGGATGGTTCTATACTCTCATGGTATTGTCTACTGCATTATTTGGGAAGCCTGCGTTTAGGAATCTCATTTGCAATGGACTTGTCCTGGCTGAGGATGGAAAGAAGATGAGTAAAAGTTTGAAAAATTATCCATCACCTATGGAAGTTATTAATGATTATGGAGCTGATGCATTACGATTATACCTGATAAACTCTCCAGTTGTGCGTGCAGAGACCTTGCGTTTCAAAAAGGAAGGTGTTTTTAGTGTTGTCAAAGACGTGTTCCTCCCGTGGTACAATGCTTATCGGTTCCTTGTACAGAATGCAAAGAGGCTAGAGGTTGAAGGGCTTGCACCATTTACTCCTATTGACGCTGGAACTCTTCAAAATTCATCCAATGTGCTTGATCAGTGGATAAACTCAGCTACCCAGAGTCTTGTTCATTTTGTTCACCAAGAAATGAATGCATACCGCCTTTACACGGTGGTACCTTATCTCTTGAAGTTTCTTGACAACCTTACAAATATTTATGTGCGATTCAACCGCAAAAGATTAAAAGGTCGTACTGGGGAAGAAGACTGCCGAACAGCTCTATCAACTTTATACAATGTGCTTTTAATATCATGTAAGGTGATGGCGCCATTCACACCTTTCTTTTCAGAAGGTCTGTATCAAAATATGCGGAGAGTTTGTACTGGATCAGAGGAAAGTATTCACTATTGCAGCTTTCCTCAAGTAGAGGGGGAGAGGAATGAACGGATTGAACAGAGTGTTGCAAGAATGATGACCATTATTGATCTTGCTCGCAATATCCGTGAACGGCACAACAAGCCTCTTAAATCGCCATTAAGGGAGATGATTGTAGTTCATCCTGATGTGGACTTTCTTGATGACATAGCTGGAAAATTGAAGGAGTATGTGCTCGAGGAACTCAATGTGAGATCTCTTATTCCATGTAACGATACTCTGAAATATGCTTCTTTGCGTGCGGAGCCTGAGTTTAGCGTGTTAGGTAAGCGACTTGGAAAGTCTATGGGGGTTGTTGCCAAAGAAGTTAAAGCAATGTCTCAGATAGATATTTTGGAATTTGAGAAAGCTGGAGAAGTTACCATTGCTTCACATTGTCTGAAACTGTCTGATATTAAGGTTGTTCGGGAATTCAAATGCCCTGATGGTTTGACAGATAGGGAGGTTGATGCTGCTGGAGATGGTGATGTTTTGGTAATATTAGATTTGCGTCTGGATGAGTCATTATACGAGGCTGGTGTTGCTCGTGAGGTTGTGAATAGAATTCAGAAATTGAGGAAAAAAACTGGACTTGAACCTACAGATGCGGTTGAGGTTTACTTTGAATCTCTGGATGAAGATAAATCAATCTCCCAGCAGGTCTTGAATTCACAGGAACTCTATATTAGGGATGCAATTGGTTCCCCATTGCTTTCTTCTACATTTATGCCACCACATGCAGTTATACTTGGTGAGGAGAGTTTCCATGACATTTCCAAGCTGTCCTTCACCATATATTTGGCAAGGCCGGCACTAGTGTTCAAATCTGATGCCATTCTTTCATTGTATGGAGTGGTTTCAGGAAATACAAAATCTGTCCATGGTCTAGAAACTTACTTGCTATCAAGGGATCATTCTAATTTGAAATCTGAATTTCAACTTGGAGATGGAAAGATAACTGTTGACACCGTTGAAGGCCTCCCTGCTGTAAATGTGGTATTGGGAGAACATGTGTTTTTGACTGTTGGTGACTCCGTTTTAAGCACAAAAGGTGGACGATAA
Protein:  
MEEVCEGKEFSFPTQEEKILSFWSEIKAFETQLERTKDLPEYIFYDGPPFATGLPHYGHILAGTIKDIVTRYQTMTGHHVTRRFGWDCHGLPVEAEIDKKLGIKRRDEVLKLGIDKYNEECRGIVTRYVGEWEKVVVRVGRWIDFKNDYKTMDLKFMESVWWVFSKLFEKGLVYKGFKVMPYSTGCKTVLSNFEVQQNYKDVPDPEIMVTFPIVDDPHNAAFVAWTTTPWTLPSNLALCVNGNFDYIKVRNKYTGKVYVVAECRLSALPVEKPKSTANGPAGGSKTSNSKTKSGKAENLMDSYDLLEKVKGNELVNKKYEPLFNYFMEFSDTAFRVVADDYVTDDSGTGIVHCAPAFGEEDYRVCIGNQILSKENLIVAVDDDGCFIEKITDFGGRYVKDADKDIIEAVKAKGRLVKSGSFMHSYPFCWRSDTPLIYRAVPSWFIRVEEIKEQLLESNKQTYWVPDYVKEKRFHNWLENARDWAVSRSRFWGTPLPVWMSDDGEEVIVMDSIAKLEKLSGVKVFDLHRHNIDHITIPSSRGPEFDVLRRVEDVFDCWFESGSMPYAYIHYPFENVELFEKNFPGHFVAEGLDQTRGWFYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKSLKNYPSPMEVINDYGADALRLYLINSPVVRAETLRFKKEGVFSVVKDVFLPWYNAYRFLVQNAKRLEVEGLAPFTPIDAGTLQNSSNVLDQWINSATQSLVHFVHQEMNAYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRTGEEDCRTALSTLYNVLLISCKVMAPFTPFFSEGLYQNMRRVCTGSEESIHYCSFPQVEGERNERIEQSVARMMTIIDLARNIRERHNKPLKSPLREMIVVHPDVDFLDDIAGKLKEYVLEELNVRSLIPCNDTLKYASLRAEPEFSVLGKRLGKSMGVVAKEVKAMSQIDILEFEKAGEVTIASHCLKLSDIKVVREFKCPDGLTDREVDAAGDGDVLVILDLRLDESLYEAGVAREVVNRIQKLRKKTGLEPTDAVEVYFESLDEDKSISQQVLNSQELYIRDAIGSPLLSSTFMPPHAVILGEESFHDISKLSFTIYLARPALVFKSDAILSLYGVVSGNTKSVHGLETYLLSRDHSNLKSEFQLGDGKITVDTVEGLPAVNVVLGEHVFLTVGDSVLSTKGGR